Author/Editor     Kumuthini, Judit; Mbiyavanga, Mamana; Chimusa, Emile; Pathak, Jyotishman; Somervuo, Panu; Schaik, Ron H. N. van; Dolžan, Vita; Mizzi, Clint; Kalideen, Kusha; Ramesar, Raj S; Maček, Milan; Patrinos, George P.; Squassina, Alessio
Title     Minimum information required for a DMET experiment reporting
Type     članek
Publication year     2016
ISSN     1462-2416 - Pharmacogenomics
Language     eng
Abstract     Aim: To provide pharmacogenomics reporting guidelines, the information and tools required for reporting to public omic databases. Material & methods: For effective DMET data interpretation, sharing, interoperability, reproducibility and reporting, we propose the Minimum Information required for a DMET Experiment (MIDE) reporting. Results: MIDE provides reporting guidelines and describes the information required for reporting, data storage and data sharing in the form of XML. Conclusion: The MIDE guidelines will benefit the scientific community with pharmacogenomics experiments, including reporting pharmacogenomics data from other technology platforms, with the tools that will ease and automate the generation of such reports using the standardized MIDE XML schema, facilitating the sharing, dissemination, reanalysis of datasets through accessible and transparent pharmacogenomics data reporting.
Keywords     bioinformatics
pharmacogenomics
standardization
bioinformatika
farmakogenomika
standardizacija